ncRNA ID | novel_gar_miR2071 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr1:71672797-71672998 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 21 |
Mature sequence(if miRNA) | 182 - CCAGGUCUGGGACAUGGCAUC - 202 |
Stem-loop(if miRNA) |
--   G    G        CAUCA       ----AAC   U  UA  - UAAGA      UGGGACAUGCAUCGGCCUCAAGACGUAAGCCAGUGUAAGACAUGUCU   CCA GUCU GGACAUGG     GCAUUGA       GAG GU  GU G     CAUGUC                                               G   ||| |||| ||||||||     |||||||       ||| ||  || |     ||||||   GGU CAGG UCUGUACC     UGUGACU       GCA UC  GG U     ACGUAC                                               G AC   A    G        -AGAA       GUGUAGA   -  --  C -----      AGGGUCUGUACCAGAAUGUGACUGUGUAGAGCAUCGGCUACGUACAG |
Stem-loop sequence | CCAGGUCUGGGACAUGGCAUCAGCAUUGAAACGAGUGUUAGUGUAAGACAUGUCUGGGACAUGCAUCGGCCUCAAGACGUAAGCCAGUGUAAGACAUGUCUGGGACAUGCAUCGGCUACGAGAUGUGUCAGUGUAAGACCAUGUCUGGGACAUGCAUCGGCUACGAGAUGUGUCAGUGUAAGACCAUGUCUGGGACAUGGCA |