| ncRNA ID | novel_gar_miR2065 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr1:79427926-79428096 [-] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR1029587 |
| Length | 20 |
| Mature sequence(if miRNA) | 152 - AGAGGAUAAUGUACUUCAAC - 171 |
| Stem-loop(if miRNA) |
AG ---- CUC C C U CUAA CAAAACUGAUCCCAACUAAGUUAAGACCCAGU AGGAU AAUGUACUUCAACA UCGAA C AUGUCCUC UGCA CAA U ||||| |||||||||||||| ||||| | |||||||| |||| ||| G UCCUA UUAUAUGAAGUUGU AGUUU G UGCAGGAG AUGU AUA G -A CUAU ACA A A U ---A AUGAAUAUGGAAUAAGUUAAAUUGAUUAGUUU |
| Stem-loop sequence | AGAGGAUAAUGUACUUCAACACUCUCGAACCCAUGUCCUCUUGCACUAACAACAAAACUGAUCCCAACUAAGUUAAGACCCAGUUGGUUUGAUUAGUUAAAUUGAAUAAGGUAUAAGUAAUAAUGUAUGAGGACGUAGAUUUGAACAUGUUGAAGUAUAUUUAUCAUCCUA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017791595.1 |
|
2.5 | PREDICTED: Gossypium arboreum putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440 (LOC108487293), transcript variant X1, mRNA | putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440(LOC108487293) | coding protein | psRNATarget |