ncRNA ID | novel_gar_miR2064 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr1:79558768-79558935 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 145 - GGCGUUUUUAGUGGCGUUUGGACA - 168 |
Stem-loop(if miRNA) |
--GGC      A             A           -AAAUA   UACA     U       -  UG        A AAAAAAC      GUUUUU GUGGCGUUUGGAC AAAAACGCCAC      UUA    UUAGC GCGUUUG AU  AAAACGCC C       U      |||||| ||||||||||||| |||||||||||      |||    ||||| ||||||| ||  |||||||| |      CAAAAA CGCCGCAAACCUG UUUUUGCGGUG      AAU    AAUCG UGCAAAC UG  UUUUGCGG G       G CGAGU      G             G           AUAACG   CAAA     C       C  GU        C AUAACGA |
Stem-loop sequence | GGCGUUUUUAGUGGCGUUUGGACAAAAAACGCCACAAAUAUUAUACAUUAGCUGCGUUUGAUUGAAAACGCCACAAAAAACUGAGCAAUAGCGGCGUUUUUGGUCCAAACGUCGCUAAAAACUAAGCAAUAGUGGCGUUUUUGGUCCAAACGCCGCGAAAAACUGAGC |