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BaseInfo

ncRNA ID novel_gar_miR2053
Species Gossypium arboreum
Class miRNA
Genome position Chr1:67140166-67140345 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029586
Length 20
Mature sequence(if miRNA) 161 - CCUGUACUUAGAUCAUGGAG - 180
Stem-loop(if miRNA) --CC    -C        U                 -CUAA    A             UUUC              UUAUAAUUGUC      UU
    UGUA  UUAGAUCA GGAGUAAAUUGGUCCUU     UAAA AUUUCAUCUAUUU    UGUUAAAAAUUGGU           UGGUUA  C
    ||||  |||||||| |||||||||||||||||     |||| |||||||||||||    ||||||||||||||           ||||||
    ACAU  AAUCUAGU UCUCGUUUAAUCAGGAA     AUUU UAAAGUAGGUAAA    ACAAUUUUUAACCG           ACCGAU  U
AUGA    UC        U                 AAACA    C             UAUC              ----------U      UG
Stem-loop sequence CCUGUACUUAGAUCAUGGAGUAAAUUGGUCCUUCUAAUAAAAAUUUCAUCUAUUUUUUCUGUUAAAAAUUGGUUUAUAAUUGUCUGGUUAUUCUGUUAGCCAUGCCAAUUUUUAACACUAUAAAUGGAUGAAAUCUUUAACAAAAAGGACUAAUUUGCUCUUUGAUCUAACUUACAAGUA