ncRNA ID | novel_gar_miR2053 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr1:67140166-67140345 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029586 |
Length | 20 |
Mature sequence(if miRNA) | 161 - CCUGUACUUAGAUCAUGGAG - 180 |
Stem-loop(if miRNA) |
--CC    -C        U                 -CUAA    A             UUUC              UUAUAAUUGUC      UU     UGUA  UUAGAUCA GGAGUAAAUUGGUCCUU     UAAA AUUUCAUCUAUUU    UGUUAAAAAUUGGU           UGGUUA  C     ||||  |||||||| |||||||||||||||||     |||| |||||||||||||    ||||||||||||||           ||||||     ACAU  AAUCUAGU UCUCGUUUAAUCAGGAA     AUUU UAAAGUAGGUAAA    ACAAUUUUUAACCG           ACCGAU  U AUGA    UC        U                 AAACA    C             UAUC              ----------U      UG |
Stem-loop sequence | CCUGUACUUAGAUCAUGGAGUAAAUUGGUCCUUCUAAUAAAAAUUUCAUCUAUUUUUUCUGUUAAAAAUUGGUUUAUAAUUGUCUGGUUAUUCUGUUAGCCAUGCCAAUUUUUAACACUAUAAAUGGAUGAAAUCUUUAACAAAAAGGACUAAUUUGCUCUUUGAUCUAACUUACAAGUA |