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BaseInfo

ncRNA ID novel_gar_miR2040
Species Gossypium arboreum
Class miRNA
Genome position Chr1:67502670-67502804 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029586
Length 24
Mature sequence(if miRNA) 1 - GAUUAGUAUUUGGUUCACUGACGG - 24
Stem-loop(if miRNA) -- C    AU            C  AUAACGAUAAUUCU    UCCAC GCAGUGGAGUAAAAAAAUUCCA
  G UAGU  AUCAAAUACUAA CU              UCUU     U                      C
  | ||||  |||||||||||| ||              ||||     |
  C GUCA  UGGUUUAUGAUU GA              UUGU     G                      A
GG A    CU            A  --AUUUUUUUUUUU    ----- AACCAUAGUAGAAUCUAAACGA
Stem-loop sequence GCUAGUAUAUCAAAUACUAACCUAUAACGAUAAUUCUUCUUUCCACUGCAGUGGAGUAAAAAAAUUCCACAAGCAAAUCUAAGAUGAUACCAAGUGUUUUUUUUUUUUUAAGAUUAGUAUUUGGUUCACUGACGG