ncRNA ID | novel_gar_miR2037 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr1:104999286-104999479 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 171 - CUCUGUAGCGGCGGAGAGCAGAUU - 194 |
Stem-loop(if miRNA) |
--      A  G       --       GAAG   AUA      G G       A  --G     GA  -     GAAG  AACA      G G       A   CUCUGU GC GCGGAGA  GCAGAUU    AUA   GAUUUG C UCUCUGU GC   GUGGA  GC AGAUC    AU    GAUUUG C UCUCUGU G   |||||| || |||||||  |||||||    |||   |||||| | ||||||| ||   |||||  || |||||    ||    |||||| | |||||||   GAGGCG UG UGUCUCU  UGUUUAG    UAU   CUAGAC G AGAGGCG UG   UAUCU  CG UUUAG    UA    CUAGAC G AGAGGCG C GA      G  A       GC       ACAA   AAA      - -       G  AUG     -G  G     ACAA  GAAG      - -       G |
Stem-loop sequence | CUCUGUAGCGGCGGAGAGCAGAUUGAAGAUAAUAGAUUUGGCGUCUCUGUAGCGGUGGAGAGCAGAUCGAAGAUAACAGAUUUGGCGUCUCUGUAGCGGCGGAGAGCAGAUCGAAGAUAACAGAUUUGGCGUCUAUGUAGUGGCGGAGAGCAGAUCAAAUAUAACAGAUUUGUCGUCUCUGUAGUGGCGGAGAG |