ncRNA ID | novel_gar_miR2028 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr12:143916677-143916740 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGACUGAAUUUGGAUCUCAGACGG - 24 |
Stem-loop(if miRNA) |
--  G  A          -   -  -UUUCUU G   GU CU AGAUUCAGAU CAG CU       C U   || || |||||||||| ||| ||       |   CA GA UCUAGGUUUA GUC GA       G A GG  -  C          A   A  CUAUAUU A |
Stem-loop sequence | GUGCUAAGAUUCAGAUCAGCUUUUCUUCGUAAGUUAUAUCAGACUGAAUUUGGAUCUCAGACGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017787079.1 |
|
3.0 | PREDICTED: Gossypium arboreum uncharacterized LOC108483596 (LOC108483596), mRNA | uncharacterized LOC108483596(LOC108483596) | coding protein | psRNATarget |