ncRNA ID | novel_gar_miR2027 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr12:138426687-138426763 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUACUGUAUUCCUUUGAAACAAGC - 24 |
Stem-loop(if miRNA) |
--       A   C         AGC   UCU    GUUC   AUACUGU UUC UUUGAAACA   GAA   UGAC    A   ||||||| ||| |||||||||   |||   ||||    A   UAUGAUA AAG AAAUUUUGU   CUU   ACUG    U UU       -   A         GAA   ---    AGUU |
Stem-loop sequence | AUACUGUAUUCCUUUGAAACAAGCGAAUCUUGACGUUCAAUUUGAGUCAUUCAAGUGUUUUAAAAGAAAUAGUAUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017767062.1 |
|
2.5 | PREDICTED: Gossypium arboreum potassium transporter 5 (LOC108466688), mRNA | potassium transporter 5(LOC108466688) | coding protein | psRNATarget |