ncRNA ID | novel_gar_miR2024 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr12:114892510-114892583 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 51 - AGGAUAAAAUUACUGAUGCAGCAU - 74 |
Stem-loop(if miRNA) |
--  CA        U  A              AAAUU   GU  UAUUAGUA UU UAUCUUGAAUUUUA     U   ||  |||||||| || ||||||||||||||   CG  GUAGUCAU AA AUAGGACUUAAAAU     U UA  AC        U  A              ACUAC |
Stem-loop sequence | GUCAUAUUAGUAUUUAUAUCUUGAAUUUUAAAAUUUUCAUCAUAAAAUUCAGGAUAAAAUUACUGAUGCAGCAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017748228.1 |
|
2.5 | PREDICTED: Gossypium arboreum WAT1-related protein At4g08300 (LOC108450552), mRNA | WAT1-related protein At4g08300(LOC108450552) | coding protein | psRNATarget | |||||||||
XM_017750017.1 |
|
2.5 | PREDICTED: Gossypium arboreum WAT1-related protein At4g08300-like (LOC108452247), mRNA | WAT1-related protein At4g08300-like(LOC108452247) | coding protein | psRNATarget |