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BaseInfo

ncRNA ID	ath-miRf11143-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - UGACAGAAAGAGAGGUGAGCA - NA
Stem-loop(if miRNA)	--C           A     G        CA  C   AA     AG GAUAGG   AACUGACAGAA GAGAG UGAGCACG  CA GCA  GUUAU  A ||||||   ||||||||||| ||||| ||||||||  || |||  ||||| UUGUCU   UUGACUGUCUU CUCUC ACUCGUGU  GU CGU  CAAUA  C       CUU           -     -        AC  C   GA     CA
Stem-loop sequence	GAUAGGCAACUGACAGAAAGAGAGGUGAGCACGCACACGCAAAGUUAUAGACACAUAACAGUGCCUGCAUGUGCUCACUCUCUUCUGUCAGUUUUCUCUGUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JA894874.1	ncRNA:21   ACGAGUGGAGAGAAAGACAGU   1   |||||||=*|||||||||||| targets:82   UGCUCACUGCUCUUUCUGUCA   102 Target Full Sequence	2.5	Sequence 191 from Patent WO2011067745	NA	coding protein	psRNATarget
NM_101391.3	ncRNA:21   ACGAGUGGAGAGAAAGACAGU   1   ||||||*|||||*|||||||| targets:939   UGCUCAGCUCUCCUUCUGUCA   959 Target Full Sequence	2.5	Arabidopsis thaliana hypothetical protein mRNA	hypothetical protein(AT1G15230)	coding protein	psRNATarget
AK317032.1	ncRNA:19   GAGUGGAGAGAAAGACAGU   1   |||=|||||||||||*||| targets:1   CUCGCCUCUCUUUCUCUCA   19 Target Full Sequence	2.5	Arabidopsis thaliana AT2G43410 mRNA, complete cds, clone: RAFL16-16-A15	NA	coding protein	psRNATarget
NM_001203825.2	ncRNA:21   ACGAGUGGAGAGAAAGACAGU   1   **||=||||||||||||||*| targets:2362   CUCUUACCUCUCUUUCUGUGA   2382 Target Full Sequence	2.5	Arabidopsis thaliana GATA transcription factor 26 (GATA26), mRNA	GATA transcription factor 26(GATA26)	coding protein	psRNATarget
NM_117864.4	ncRNA:21   ACGAGUGGAGAGAAAGACAGU   1   **||=||||||||||||||*| targets:2342   CUCUUACCUCUCUUUCUGUGA   2362 Target Full Sequence	2.5	Arabidopsis thaliana GATA transcription factor 26 (GATA26), mRNA	GATA transcription factor 26(GATA26)	coding protein	psRNATarget
AY062562.1	ncRNA:21   ACGAGUGGAGAGAAAGACAGU   1   **||=||||||||||||||*| targets:2242   CUCUUACCUCUCUUUCUGUGA   2262 Target Full Sequence	2.5	Arabidopsis thaliana Unknown protein (Z97343.42) mRNA, complete cds	NA	coding protein	psRNATarget
NM_001203826.1	ncRNA:21   ACGAGUGGAGAGAAAGACAGU   1   **||=||||||||||||||*| targets:2181   CUCUUACCUCUCUUUCUGUGA   2201 Target Full Sequence	2.5	Arabidopsis thaliana GATA transcription factor 26 (GATA26), mRNA	GATA transcription factor 26(GATA26)	coding protein	psRNATarget
BX826713.1	ncRNA:21   ACGAGUGGAGAGAAAGACAGU   1   **||=||||||||||||||*| targets:2033   CUCUUACCUCUCUUUCUGUGA   2053 Target Full Sequence	2.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB57ZB09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
NM_001198036.2	ncRNA:21   ACGAGUGGAGAGAAAGACAGU   1   **|||==|||||||||||||* targets:192   AUCUCGUCUCUCUUUCUGUCU   212 Target Full Sequence	3.0	Arabidopsis thaliana starch synthase 3 (SS3), mRNA	starch synthase 3(SS3)	coding protein	psRNATarget
NM_101044.3	ncRNA:21   ACGAGUGGAGAGAAAGACAGU   1   **|||==|||||||||||||* targets:5   AUCUCGUCUCUCUUUCUGUCU   25 Target Full Sequence	3.0	Arabidopsis thaliana starch synthase 3 (SS3), mRNA	starch synthase 3(SS3)	coding protein	psRNATarget