ncRNA ID | novel_gar_miR2016 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr1:74005350-74005426 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029586 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGUAGGACUCGAGGAGGAUGCUGC - 24 |
Stem-loop(if miRNA) |
--   -       GA       G   AAAAU     A   G   AGU UCCUCCU  GGUUCUG UGG     UGAGG AUG U   ||| |||||||  ||||||| |||     ||||| ||| U   UCG AGGAGGA  UCAGGAU AUU     GCUCU UGC G CG   U       GC       G   -----     A   U |
Stem-loop sequence | AGUUCCUCCUGAGGUUCUGGUGGAAAAUUGAGGAAUGGUUGUCGUAUCUCGUUAGUAGGACUCGAGGAGGAUGCUGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017765933.1 |
|
1.5 | PREDICTED: Gossypium arboreum protein EXORDIUM-like 4 (LOC108465577), mRNA | protein EXORDIUM-like 4(LOC108465577) | coding protein | psRNATarget |