ncRNA ID | novel_gar_miR2014 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr1:127803990-127804075 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGCAUGAUGGUAUAUUCUGAUGCG - 24 |
Stem-loop(if miRNA) |
--U    U U         G A   -----      UA     CU  C    GUUA G AUGUAUUAU G UGC     AAAAUC  AUAUU  GC U    |||| | ||||||||| | |||     ||||||  |||||  ||    UAGU C UAUAUGGUA U ACG     UUUUAG  UGUAA  UG C GCG    - U         G -   AAAGU      --     -U  U |
Stem-loop sequence | UGUUAUGUAUGUAUUAUGGAUGCAAAAUCUAAUAUUCUGCCUCUGUUAAUGUGAUUUUUGAAAGCAUGAUGGUAUAUUCUGAUGCG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017754969.1 |
|
2.5 | PREDICTED: Gossypium arboreum LRR receptor-like serine/threonine-protein kinase RCH1 (LOC108456341), mRNA | LRR receptor-like serine/threonine-protein kinase RCH1(LOC108456341) | coding protein | psRNATarget |