ncRNA ID | novel_gar_miR2012 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr1:128570474-128570673 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UGUUAGAGAGAUAACGGAGCU - 21 |
Stem-loop(if miRNA) |
--        C        -  A    CU     GG  U        A         ACA     A     CUAGUUGU     -UGA    A      UAA   CUUUGUUA CUCUCUAA AG UAGU  UAUGU  UA UCCAAAUA GUUUUAAAU   AACUU AAUGU        UGAGA    AAAU AGAUUU   U   |||||||| |||||||| || ||||  |||||  || |||||||| |||||||||   ||||| |||||        |||||    |||| ||||||   U   GAGGCAAU GAGAGAUU UC GUCA  AUGUA  GU AGGUUUAU CAAAAUUUA   UUGAA UUAUA        ACUCU    UUUA UUUAAA   A UC        A        G  -    AG     UU  U        C         CAG     C     --AAAUGU     CAGA    A      UAA |
Stem-loop sequence | CUUUGUUACCUCUCUAAAGAUAGUCUUAUGUGGUAUUCCAAAUAAGUUUUAAAUACAAACUUAAAUGUCUAGUUGUUGAGAUGAAAAUAAGAUUUUAAUUAAAUAAAUUUAAUUUAGACUCUCAUGUAAAAUAUUCAAGUUGACAUUUAAAACCUAUUUGGAUUGUUAUGUAGAACUGCUGUUAGAGAGAUAACGGAGCU |