Search result

BaseInfo

ncRNA ID novel_gar_miR2012
Species Gossypium arboreum
Class miRNA
Genome position Chr1:128570474-128570673 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587
Length 21
Mature sequence(if miRNA) 1 - UGUUAGAGAGAUAACGGAGCU - 21
Stem-loop(if miRNA) --        C        -  A    CU     GG  U        A         ACA     A     CUAGUUGU     -UGA    A      UAA
  CUUUGUUA CUCUCUAA AG UAGU  UAUGU  UA UCCAAAUA GUUUUAAAU   AACUU AAUGU        UGAGA    AAAU AGAUUU   U
  |||||||| |||||||| || ||||  |||||  || |||||||| |||||||||   ||||| |||||        |||||    |||| ||||||   U
  GAGGCAAU GAGAGAUU UC GUCA  AUGUA  GU AGGUUUAU CAAAAUUUA   UUGAA UUAUA        ACUCU    UUUA UUUAAA   A
UC        A        G  -    AG     UU  U        C         CAG     C     --AAAUGU     CAGA    A      UAA
Stem-loop sequence CUUUGUUACCUCUCUAAAGAUAGUCUUAUGUGGUAUUCCAAAUAAGUUUUAAAUACAAACUUAAAUGUCUAGUUGUUGAGAUGAAAAUAAGAUUUUAAUUAAAUAAAUUUAAUUUAGACUCUCAUGUAAAAUAUUCAAGUUGACAUUUAAAACCUAUUUGGAUUGUUAUGUAGAACUGCUGUUAGAGAGAUAACGGAGCU