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BaseInfo

ncRNA ID novel_gar_miR2010
Species Gossypium arboreum
Class miRNA
Genome position Chr11:76030373-76030425 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587
Length 23
Mature sequence(if miRNA) 1 - CUGAGUUGUCAGAAGCAUGGGCA - 23
Stem-loop(if miRNA) --  G   UG        A     AA
  CU AGU  UCAGAAGC UGGGC  G
  || |||  |||||||| |||||  A
  GA UCA  AGUCUUUG GCUUG  G
CU  G   UA        G     GG
Stem-loop sequence CUGAGUUGUCAGAAGCAUGGGCAAGAGGGGUUCGGGUUUCUGAAUACUGAGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017749683.1
ncRNA:23   ACG------GGUACGAAGACUGUUGAGUC   1
  |||------=||*|||||||=||||||||
targets:94   UGCACAAAUUCAAGCUUCUGGCAACUCAG   122

2.5 PREDICTED: Gossypium arboreum uncharacterized LOC108451965 (LOC108451965), mRNA uncharacterized LOC108451965(LOC108451965) coding protein psRNATarget