| ncRNA ID | novel_gar_miR2007 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr11:72974290-72974485 [+] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR1029587 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - AUACGUGGAUUGCUACGUGAAUAA - 24 |
| Stem-loop(if miRNA) |
-- C GA C U UUUUUU AUUC -- AC UA -A A AUACGUGGAUUG UACGU AUAACA GU GGUAUUUAAUUAA AAAUUUUAAAA AAAAAA AUUAUAAA UAUUUUU AAU UUAA A |||||||||||| ||||| |||||| || ||||||||||||| ||||||||||| |||||| |||||||| ||||||| ||| |||| UGUGUACUUGAC GUGUA UAUUGU CA UCAUAAAUUAAUU UUUAAAAUUUU UUUUUU UAAUAUUU AUAAAAA UUA AAUU C UA A AA U C ------ -AUA CA AU UC AA A |
| Stem-loop sequence | AUACGUGGAUUGCUACGUGAAUAACACGUUGGUAUUUAAUUAAUUUUUUAAAUUUUAAAAAUUCAAAAAAAUUAUAAAACUAUUUUUUAAAUAUUAAAACAUUAAAAAUUCUAAAAAUAUAUUUAUAAUACUUUUUUAUAUUUUAAAAUUUUUAAUUAAAUACUCACUUGUUAUAAAUGUGACAGUUCAUGUGUAU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017761912.1 |
|
2.0 | PREDICTED: Gossypium arboreum DEAD-box ATP-dependent RNA helicase 10-like (LOC108461930), transcript variant X1, mRNA | DEAD-box ATP-dependent RNA helicase 10-like(LOC108461930) | coding protein | psRNATarget | |||||||||
| XM_017761914.1 |
|
2.0 | PREDICTED: Gossypium arboreum DEAD-box ATP-dependent RNA helicase 10-like (LOC108461930), transcript variant X2, mRNA | DEAD-box ATP-dependent RNA helicase 10-like(LOC108461930) | coding protein | psRNATarget |