ncRNA ID | novel_gar_miR2006 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr1:136202876-136203088 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 190 - AUACAUGAAACUUUGAUUGUGGUU - 213 |
Stem-loop(if miRNA) |
--          C       G       AAUAUAUA     AACUUUAAUUUUGAUUCG     --     UUUAAA  A     UAU    --AUU             G   AA  UAA   AUACAUGAAA UUUGAUU UGGUUUA        CAUGA                  AUCAU  ACACA      GA AUAAA   AUCA     UAUUUAUAUAUUG AUA  UA   U   |||||||||| ||||||| |||||||        |||||                  |||||  |||||      || |||||   ||||     ||||||||||||| |||  ||   UAUGUACUUU AAACUAA ACCAAAU        GUACU                  UAGUA  UGUGU      CU UAUUU   UAGU     AUAAAUAUAUAAC UAU  GU   U AG          A       -       ---CAAGA     ------------------     AU     UAACAA  A     ---    AAAAU             G   GA  UUA |
Stem-loop sequence | AUACAUGAAACUUUGAUUGUGGUUUAAAUAUAUACAUGAAACUUUAAUUUUGAUUCGAUCAUACACAUUUAAAGAAAUAAAUAUAUCAAUUUAUUUAUAUAUUGGAUAAAUAUAAUUAUUUGAGUAUGCAAUAUAUAAAUAUAAAAUGAUUUUAUAUCAACAAUUGUGUUAAUGAUUCAUGAGAACUAAACCAAAUCAAAAUUUCAUGUAUGA |