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BaseInfo

ncRNA ID novel_gar_miR2004
Species Gossypium arboreum
Class miRNA
Genome position Chr1:136412570-136412648 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587
Length 21
Mature sequence(if miRNA) 59 - CCUACCAAAGGAAAUAUGGAC - 79
Stem-loop(if miRNA) --CC                        GA  A   UCA
    UACCAAAGGAAAUAUGGACAUUUU  CA GGU   A
    ||||||||||||||||||||||||  || |||   A
    AUGGUUUCCUUUAUACCUGUAAAA  GU UCA   C
GUGA                        GG  A   UUU
Stem-loop sequence CCUACCAAAGGAAAUAUGGACAUUUUGACAAGGUUCAAACUUUACUAUGGGAAAAUGUCCAUAUUUCCUUUGGUAAGUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017751875.1
ncRNA:21   CAGGUAUAAAGGAAACCAUCC   1
  **||||*||||||||||||||
targets:326   CCCCAUUUUUCCUUUGGUAGG   346

1.0 PREDICTED: Gossypium arboreum heterogeneous nuclear ribonucleoprotein 1-like (LOC108453645), mRNA heterogeneous nuclear ribonucleoprotein 1-like(LOC108453645) coding protein psRNATarget