ncRNA ID | novel_gar_miR2004 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr1:136412570-136412648 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 21 |
Mature sequence(if miRNA) | 59 - CCUACCAAAGGAAAUAUGGAC - 79 |
Stem-loop(if miRNA) |
--CC                        GA  A   UCA     UACCAAAGGAAAUAUGGACAUUUU  CA GGU   A     ||||||||||||||||||||||||  || |||   A     AUGGUUUCCUUUAUACCUGUAAAA  GU UCA   C GUGA                        GG  A   UUU |
Stem-loop sequence | CCUACCAAAGGAAAUAUGGACAUUUUGACAAGGUUCAAACUUUACUAUGGGAAAAUGUCCAUAUUUCCUUUGGUAAGUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017751875.1 |
|
1.0 | PREDICTED: Gossypium arboreum heterogeneous nuclear ribonucleoprotein 1-like (LOC108453645), mRNA | heterogeneous nuclear ribonucleoprotein 1-like(LOC108453645) | coding protein | psRNATarget |