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BaseInfo

ncRNA ID	novel_gar_miR2002
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr1:140190226-140190294 [-]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR1029587
Length	21
Mature sequence(if miRNA)	49 - GAAGCUGCCAGCAUGAUCUAA - 69
Stem-loop(if miRNA)	--          G        A    -     CUC   GAAGCUGCCA CAUGAUCU AACU UCCUU   U   |||||||||| |||||||| |||| |||||   G   CUUCGAUGGU GUACUAGA UUGG AGGAA   U CA          -        C    U     UUU
Stem-loop sequence	GAAGCUGCCAGCAUGAUCUAAACUUCCUUCUCUGUUUUAAGGAUGGUUCAGAUCAUGUGGUAGCUUCAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017764556.1	ncRNA:21   AAUCUAGUACGACCGUCGAAG   1   ||||||||*|||||||||||* targets:2046   UUAGAUCAGGCUGGCAGCUUG   2066 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum auxin response factor 8-like (LOC108464315), transcript variant X4, mRNA	auxin response factor 8-like(LOC108464315)	coding protein	psRNATarget
XM_017764555.1	ncRNA:21   AAUCUAGUACGACCGUCGAAG   1   ||||||||*|||||||||||* targets:2220   UUAGAUCAGGCUGGCAGCUUG   2240 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum auxin response factor 8-like (LOC108464315), transcript variant X3, mRNA	auxin response factor 8-like(LOC108464315)	coding protein	psRNATarget
XM_017764553.1	ncRNA:21   AAUCUAGUACGACCGUCGAAG   1   ||||||||*|||||||||||* targets:2721   UUAGAUCAGGCUGGCAGCUUG   2741 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum auxin response factor 8-like (LOC108464315), transcript variant X1, mRNA	auxin response factor 8-like(LOC108464315)	coding protein	psRNATarget
XM_017764554.1	ncRNA:21   AAUCUAGUACGACCGUCGAAG   1   ||||||||*|||||||||||* targets:2808   UUAGAUCAGGCUGGCAGCUUG   2828 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum auxin response factor 8-like (LOC108464315), transcript variant X2, mRNA	auxin response factor 8-like(LOC108464315)	coding protein	psRNATarget
XM_017793690.1	ncRNA:21   AAUCUAGUACGACCGUCGAAG   1   |*||||||*|||||||||||* targets:3661   UGAGAUCAGGCUGGCAGCUUG   3681 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum auxin response factor 6 (LOC108489274), mRNA	auxin response factor 6(LOC108489274)	coding protein	psRNATarget
XM_017755785.1	ncRNA:21   AAUCUAGUACGACCGUCGAAG   1   **||||||*|||||||||||* targets:2577   AGAGAUCAGGCUGGCAGCUUG   2597 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum auxin response factor 6-like (LOC108456997), mRNA	auxin response factor 6-like(LOC108456997)	coding protein	psRNATarget