| ncRNA ID | novel_gar_miR2001 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr12:112695718-112695864 [+] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR1029586;SRR1029587 |
| Length | 24 |
| Mature sequence(if miRNA) | 124 - AAAGGACUAAUUUGCUCUUUGAUC - 147 |
| Stem-loop(if miRNA) |
--A - AGUCC CAC ACGUAC C - AUU CAAAGAGCAAAUUGGUU UUUCUGUUAAAAAUU CUGUUUGU GCUG AUUGU UG GUU C ||||||||||||||||| ||||||||||||||| |||||||| |||| ||||| || ||| C GUUUCUCGUUUAAUCAG AAAGAUAAUUUUUAA GAUAAACA UGAC UGACA AC CAA A CUA G --GUA --- AAUUUU - A ACU |
| Stem-loop sequence | ACAAAGAGCAAAUUGGUUUUUCUGUUAAAAAUUAGUCCCUGUUUGUCACGCUGACGUACAUUGUCUGGUUAUUCCAUCAAACACAACAGUUUUUAACAGUACAAAUAGAUGAAUUUUUAAUAGAAAGGACUAAUUUGCUCUUUGAUC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017752094.1 |
|
1.0 | PREDICTED: Gossypium arboreum universal stress protein PHOS32-like (LOC108453792), transcript variant X3, mRNA | universal stress protein PHOS32-like(LOC108453792) | coding protein | psRNATarget |