ncRNA ID | novel_gar_miR1997 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr11:61764979-61765099 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CUGUUCAAUGUGGAAAUUGGGCCU - 24 |
Stem-loop(if miRNA) |
--   UU     U      -U      GCU   UU    -UUUCUUUUUUU  G     UG    CUG  CAAUG GGAAAU  GGGCCU   GUU  UUCU            UU UAAAA  GA   |||  ||||| ||||||  ||||||   |||  ||||            || |||||  |A   GAU  GUUGU UCUUUA  UUUGGG   UAA  AAGA            AG GUUUU  UU CG   CG     -      UU      -UU   UU    UUUUAUAUUUUC  G     GU  |
Stem-loop sequence | CUGUUCAAUGUGGAAAUUGGGCCUGCUGUUUUUUCUUUUCUUUUUUUUUGUAAAAUGGAAUUUGUUUUGGGACUUUUAUAUUUUAGAAUUAAUUUGGGUUUUUAUUUCUUGUUGGCUAGGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017789124.1 |
|
1.0 | PREDICTED: Gossypium arboreum uncharacterized LOC108485302 (LOC108485302), mRNA | uncharacterized LOC108485302(LOC108485302) | coding protein | psRNATarget |