ncRNA ID | novel_gar_miR1993 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr1:144006662-144006802 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 118 - ACUGACAUGUCGUCCAUAUGGCAA - 141 |
Stem-loop(if miRNA) |
--U   CG          AC                         U       A U      U   AAAU    UCA  UGGAUGAUAU  CAGUAUUUAAUUAAUUUUUUAAAAU UUAAAAA U UUAAAA UAU    U    |||  ||||||||||  ||||||||||||||||||||||||| ||||||| | |||||| |||    A    GGU  ACCUGCUGUA  GUCAUAAAUUAAUUAAAAAAUUUUA AAUUUUU A AAUUUU AUA    U AAC   AU          CA                         U       C C      U   AAAA |
Stem-loop sequence | UUCACGUGGAUGAUAUACCAGUAUUUAAUUAAUUUUUUAAAAUUUUAAAAAAUUUUAAAAUUAUAAAUUAUAAAAAUAUUUUUAACACUUUUUAAUAUUUUAAAAAAUUAAUUAAAUACUGACAUGUCGUCCAUAUGGCAA |