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BaseInfo

ncRNA ID novel_gar_miR1991
Species Gossypium arboreum
Class miRNA
Genome position Chr1:140398295-140398336 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587
Length 19
Mature sequence(if miRNA) 24 - AGUGGUGUCGGAAAUGGUA - 42
Stem-loop(if miRNA) --      G A   G  UAAU
  UCAUUU U ACA CC    U
  |||||| | ||| ||    U
  GGUAAA G UGU GG    U
AU      G C   -  UGAC
Stem-loop sequence UCAUUUGUAACAGCCUAAUUUUCAGUGGUGUCGGAAAUGGUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017750009.1
ncRNA:19   AUGGUAAAGGCUGUGGUGA   1
  |=|||*||||||||||||*
targets:959   UGCCAAUUCCGACACCACC   977

3.0 PREDICTED: Gossypium arboreum probable LRR receptor-like serine/threonine-protein kinase At1g05700 (LOC108452239), mRNA probable LRR receptor-like serine/threonine-protein kinase At1g05700(LOC108452239) coding protein psRNATarget