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BaseInfo

ncRNA ID novel_gar_miR1990
Species Gossypium arboreum
Class miRNA
Genome position Chr11:53620767-53620851 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587
Length 23
Mature sequence(if miRNA) 1 - GAGAGUGAGAUUGAAGCUCGUCA - 23
Stem-loop(if miRNA) --      GA     AA   - GU    -GA      GAG  GA
  GAGAGU  GAUUG  GCU C  CAGA   GAAAAA   AA  A
  ||||||  |||||  ||| |  ||||   ||||||   ||  A
  UUCUCA  CUAGU  CGA G  GUUU   CUUUUU   UU  A
GC      -A     GA   C UG    GAA      -AA  AA
Stem-loop sequence GAGAGUGAGAUUGAAGCUCGUCAGAGAGAAAAAGAGAAGAAAAAAUUAAUUUUUCAAGUUUGGUGCAGCAGUGAUCAACUCUUCG