ncRNA ID | novel_gar_miR1988 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr11:49612113-49612257 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAGUUAGGUCCUGAACUUGGCAAU - 24 |
Stem-loop(if miRNA) |
--  G    GU                     A        GU -      UUUUUUUUUG      UU   CC   AA UUAG  CCUGAACUUGGCAAUUGUUCU AUAUUGGG  U GAACUU          UUCAAG  AGU  U   || ||||  ||||||||||||||||||||| ||||||||  | ||||||          ||||||  |||  U   UU AAUC  GGACUUGAACCGUUAACAAGG UGUAACCC  G CUUGAA          AAGUUU  UUA  A GG  G    AG                     G        UG A      ---CCCCUAA      CU   UA |
Stem-loop sequence | AAGUUAGGUCCUGAACUUGGCAAUUGUUCUAAUAUUGGGGUUGAACUUUUUUUUUUUGUUCAAGUUAGUCCUUAAUAUUUCUUUGAAAAUCCCCAAGUUCAGGUCCCAAUGUGGGAACAAUUGCCAAGUUCAGGGACUAAGUUGG |