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BaseInfo

ncRNA ID novel_gar_miR1988
Species Gossypium arboreum
Class miRNA
Genome position Chr11:49612113-49612257 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587
Length 24
Mature sequence(if miRNA) 1 - AAGUUAGGUCCUGAACUUGGCAAU - 24
Stem-loop(if miRNA) --  G    GU                     A        GU -      UUUUUUUUUG      UU   CC
  AA UUAG  CCUGAACUUGGCAAUUGUUCU AUAUUGGG  U GAACUU          UUCAAG  AGU  U
  || ||||  ||||||||||||||||||||| ||||||||  | ||||||          ||||||  |||  U
  UU AAUC  GGACUUGAACCGUUAACAAGG UGUAACCC  G CUUGAA          AAGUUU  UUA  A
GG  G    AG                     G        UG A      ---CCCCUAA      CU   UA
Stem-loop sequence AAGUUAGGUCCUGAACUUGGCAAUUGUUCUAAUAUUGGGGUUGAACUUUUUUUUUUUGUUCAAGUUAGUCCUUAAUAUUUCUUUGAAAAUCCCCAAGUUCAGGUCCCAAUGUGGGAACAAUUGCCAAGUUCAGGGACUAAGUUGG