ncRNA ID | novel_gar_miR1984 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr1:134786965-134787152 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAGUUAAGUUCUGAAUUUGACAAU - 24 |
Stem-loop(if miRNA) |
--          CU             A   AA  A   A A   GAAUUAUUU                  A  AAAAUAAA  -UCAGAC   A   AAGUUAAGUU  GAAUUUGACAAUU UUC  AC UUA G CUU         UUGUUCAAGUUAAUCCCU AA        GC       CUC A   ||||||||||  ||||||||||||| |||  || ||| | |||         |||||||||||||||||| ||        ||       ||| U   UUCAAUUCGA  UUUGAACUGUUAA AAG  UG AAU C GAA         AACAGGUUUAAUUAGGGA UU        CG       GAG A GA          AG             C   AG  C   A C   AUUUUUUUU                  C  ----GACC  UUAACAA   C |
Stem-loop sequence | AAGUUAAGUUCUGAAUUUGACAAUUAUUCAAACAUUAAGACUUGAAUUAUUUUUGUUCAAGUUAAUCCCUAAAAAAAUAAAGCUCAGACCUCAAUACGAGAACAAUUGCCCAGUUCAGGGAUUAAUUUGGACAAUUUUUUUUAAAGCCAUAACGUGAGAACAAUUGUCAAGUUUGAAGCUUAACUUAG |