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BaseInfo

ncRNA ID novel_gar_miR1984
Species Gossypium arboreum
Class miRNA
Genome position Chr1:134786965-134787152 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587
Length 24
Mature sequence(if miRNA) 1 - AAGUUAAGUUCUGAAUUUGACAAU - 24
Stem-loop(if miRNA) --          CU             A   AA  A   A A   GAAUUAUUU                  A  AAAAUAAA  -UCAGAC   A
  AAGUUAAGUU  GAAUUUGACAAUU UUC  AC UUA G CUU         UUGUUCAAGUUAAUCCCU AA        GC       CUC A
  ||||||||||  ||||||||||||| |||  || ||| | |||         |||||||||||||||||| ||        ||       ||| U
  UUCAAUUCGA  UUUGAACUGUUAA AAG  UG AAU C GAA         AACAGGUUUAAUUAGGGA UU        CG       GAG A
GA          AG             C   AG  C   A C   AUUUUUUUU                  C  ----GACC  UUAACAA   C
Stem-loop sequence AAGUUAAGUUCUGAAUUUGACAAUUAUUCAAACAUUAAGACUUGAAUUAUUUUUGUUCAAGUUAAUCCCUAAAAAAAUAAAGCUCAGACCUCAAUACGAGAACAAUUGCCCAGUUCAGGGAUUAAUUUGGACAAUUUUUUUUAAAGCCAUAACGUGAGAACAAUUGUCAAGUUUGAAGCUUAACUUAG