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BaseInfo

ncRNA ID	novel_gar_miR1981
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr11:41438816-41438880 [+]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR1029587
Length	24
Mature sequence(if miRNA)	1 - CUGAAGAACAUGACCUUUAGCAGC - 24
Stem-loop(if miRNA)	--       A    AC       A   C   UA   CUGAAGA CAUG  CUUUAGC GCG UUU  U   ||||||| ||||  ||||||| ||| |||   GAUUUCU GUAC  GAAGUUG CGC AAA  U GC       A    AA       C   -   CG
Stem-loop sequence	CUGAAGAACAUGACCUUUAGCAGCGCUUUUAUUGCAAACGCCGUUGAAGAACAUGAUCUUUAGCG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017786556.1	ncRNA:24   CGACGAUUUCCAGUACAAGAAGUC   1   **|*=|*||||||||||||||||* targets:1004   AAUUUUCAAGGUCAUGUUCUUCAU   1027 Target Full Sequence	2.0	PREDICTED: Gossypium arboreum UBP1-associated protein 2B-like (LOC108483271), transcript variant X1, mRNA	UBP1-associated protein 2B-like(LOC108483271)	coding protein	psRNATarget
XM_017786557.1	ncRNA:24   CGACGAUUUCCAGUACAAGAAGUC   1   **|*=|*||||||||||||||||* targets:1004   AAUUUUCAAGGUCAUGUUCUUCAU   1027 Target Full Sequence	2.0	PREDICTED: Gossypium arboreum UBP1-associated protein 2B-like (LOC108483271), transcript variant X2, mRNA	UBP1-associated protein 2B-like(LOC108483271)	coding protein	psRNATarget
XM_017768165.1	ncRNA:24   CGACGAUUUCCAGUACAAGAAGUC   1   ||*|||||||*||||||||||=|| targets:1504   GCCGCUAAAGAUCAUGUUCUUUAG   1527 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum diphthamide biosynthesis protein 2-like (LOC108467522), mRNA	diphthamide biosynthesis protein 2-like(LOC108467522)	coding protein	psRNATarget