ncRNA ID | novel_gar_miR1980 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr11:40819798-40819865 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 45 - GCUAUAGGUCGAUCAGUAGCGGCG - 68 |
Stem-loop(if miRNA) |
--       A        A    A         U   CCGCUAU GGUCGAUC GUAG GGCGUUUUU U   ||||||| |||||||| |||| |||||||||   GGCGAUG CUAGCUGG UAUC UCGCAAAAA A GC       A        A    G         C |
Stem-loop sequence | CCGCUAUAGGUCGAUCAGUAGAGGCGUUUUUUUACAAAAACGCUGCUAUAGGUCGAUCAGUAGCGGCG |