ncRNA ID | novel_gar_miR1978 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr12:90685457-90685598 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029586 |
Length | 21 |
Mature sequence(if miRNA) | 122 - AUAGAAGGCUCAAUUUGCUCA - 142 |
Stem-loop(if miRNA) |
--                                                      C  --AG   ACAAAA   AGCAAAUUGAGCCUUCUAUUAAAAAUUUCAUCCAUUUUUACUGUUGAAAACUGG GC    AUG      U   |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    |||   UCGUUUAACUCGGAAGAUAAUUUUUAAGGUAGGUAAAAAUGAUAAUUUUUGACC UG    UAC      A AC                                                      U  GAUA   AGAUCA |
Stem-loop sequence | AGCAAAUUGAGCCUUCUAUUAAAAAUUUCAUCCAUUUUUACUGUUGAAAACUGGCGCAGAUGACAAAAUAACUAGACAUAUAGGUUCCAGUUUUUAAUAGUAAAAAUGGAUGGAAUUUUUAAUAGAAGGCUCAAUUUGCUCA |