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BaseInfo

ncRNA ID novel_gar_miR1978
Species Gossypium arboreum
Class miRNA
Genome position Chr12:90685457-90685598 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029586
Length 21
Mature sequence(if miRNA) 122 - AUAGAAGGCUCAAUUUGCUCA - 142
Stem-loop(if miRNA) --                                                      C  --AG   ACAAAA
  AGCAAAUUGAGCCUUCUAUUAAAAAUUUCAUCCAUUUUUACUGUUGAAAACUGG GC    AUG      U
  |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    |||
  UCGUUUAACUCGGAAGAUAAUUUUUAAGGUAGGUAAAAAUGAUAAUUUUUGACC UG    UAC      A
AC                                                      U  GAUA   AGAUCA
Stem-loop sequence AGCAAAUUGAGCCUUCUAUUAAAAAUUUCAUCCAUUUUUACUGUUGAAAACUGGCGCAGAUGACAAAAUAACUAGACAUAUAGGUUCCAGUUUUUAAUAGUAAAAAUGGAUGGAAUUUUUAAUAGAAGGCUCAAUUUGCUCA