ncRNA ID | novel_gar_miR1971 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr12:39811928-39812124 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029586 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CGGCGUUUGUAGGAAAAGUGCUGC - 24 |
Stem-loop(if miRNA) |
--C         A                        A               -   CCACAAA             C   A      A  UU  -   CC    GGCGUUUGU GGAAAAGUGCUGCUAAAGGUUAUG CUUUUAGCGGCGUUU UUG       CGCCGCUAAAAGU AUG CUUUUA CG  GC UUU  C    ||||||||| |||||||||||||||||||||||| ||||||||||||||| |||       ||||||||||||| ||| |||||| ||  || |||    CCGCAAACA CCUUUUCGCGGCGAUUUUCAGUAC GAAAAUCGCCGCAAA AAC       GCGGCGAUUUUCA UAC GAAAAU GC  CG AAA  A UCA         C                        C               C   -CCUUUC             C   C      C  --  C   CA |
Stem-loop sequence | CGGCGUUUGUAGGAAAAGUGCUGCUAAAGGUUAUGACUUUUAGCGGCGUUUUUGCCACAAACGCCGCUAAAAGUCAUGACUUUUAACGUUGCUUUCCCAACAAACGCCGCUAAAAGCCAUCACUUUUAGCGGCGCUUUCCCAACAAACGCCGCUAAAAGCCAUGACUUUUAGCGGCGCUUUUCCCACAAACGCCACU |