| ncRNA ID | novel_gar_miR1959 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr11:45843165-45843310 [+] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR1029586 |
| Length | 21 |
| Mature sequence(if miRNA) | 126 - CACAGGUGUUGAACAUGGAUG - 146 |
| Stem-loop(if miRNA) |
-- --- GU A ACU GCUU G - C CUCAAAAUUUUUAAGU UA UCCA UCAGCA UCUG UGUU UGA GACA UGUG GGAUA GGGUAUG UUUUCCA U |||| |||||| |||| |||| ||| |||| |||| ||||| ||||||| ||||||| AGGU AGUUGU GGAC ACAG GCU CUGU AUAU CCUGU CCCGUAU AGAAGGU G GU ACA -- - --- ---- - A A -------UCUCAAACU UU |
| Stem-loop sequence | UCCAUCAGCAGUUCUGAUGUUACUUGAGCUUGACAGUGUGGGAUACGGGUAUGCUCAAAAUUUUUAAGUUUUUCCAUAUGUUUGGAAGAUCAAACUCUUAUGCCCAUGUCCAUAUAUGUCUCGGACACAGGUGUUGAACAUGGAUG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017790240.1 |
|
1.0 | PREDICTED: Gossypium arboreum J domain-containing protein required for chloroplast accumulation response 1 (LOC108486276), transcript variant X1, mRNA | J domain-containing protein required for chloroplast accumulation response 1(LOC108486276) | coding protein | psRNATarget |