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BaseInfo

ncRNA ID	novel_gar_miR1954
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr1:118521690-118521744 [+]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR1029586
Length	24
Mature sequence(if miRNA)	1 - CAAAACGACGUCGUUUUGGUCGGC - 24
Stem-loop(if miRNA)	--     C             U  GCCU   CAAAA GACGUCGUUUUGG CG    U   ||||| ||||||||||||| ||   GUUUU CUGCAGCAAAACC GC    A CG     A             -  AAUU
Stem-loop sequence	CAAAACGACGUCGUUUUGGUCGGCCUUAUUAACGCCAAAACGACGUCAUUUUGGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017780384.1	ncRNA:24   CGGCUGGUUUUGCUGCAGCAAAAC   1   *||--|||||||||*||||||||| targets:43   CCC--CCAAAACGAAGUCGUUUUG   64 Target Full Sequence	1.5	PREDICTED: Gossypium arboreum uncharacterized LOC108477916 (LOC108477916), mRNA	uncharacterized LOC108477916(LOC108477916)	coding protein	psRNATarget
XM_017771399.1	ncRNA:24   CGGCUGGUUUUGCUGCAGCAAAAC   1   *|=**|||||||||=||||||||* targets:369   CCUUUCCAAAACGAUGUCGUUUUU   392 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum phospholipid:diacylglycerol acyltransferase 1-like (LOC108470153), mRNA	phospholipid:diacylglycerol acyltransferase 1-like(LOC108470153)	coding protein	psRNATarget
XM_017751973.1	ncRNA:24   CGGCUGGUUUUGCUGCAGCAAAAC   1   *|=*=|||||*||||||||*|||| targets:243   ACUAGCCAAACCGACGUCGCUUUG   266 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum serpin-ZX (LOC108453706), mRNA	serpin-ZX(LOC108453706)	coding protein	psRNATarget