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BaseInfo

ncRNA ID novel_gar_miR1953
Species Gossypium arboreum
Class miRNA
Genome position Chr1:12634795-12634954 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029586
Length 24
Mature sequence(if miRNA) 137 - UUUGGACUGUCACGUAAGACUGCC - 160
Stem-loop(if miRNA) --     C    C GU  A      AG          C             ----------------------CUACG   CAGUCCAAAU
  CAGUC UACG G  AG CUAAAU  GUUUUAAAUG CAACUUGGAUGUC                           UGG          U
  ||||| |||| |  || ||||||  |||||||||| |||||||||||||                           |||
  GUCAG AUGC C  UC GGUUUA  UAAAAUUUAC GUUGAACCUACAG                           UUA          A
CC     A    A UG  A      CU          A             UCUAACAACCCUACUUUUAUUCAAAAA   AUUUAUUUAA
Stem-loop sequence CAGUCCUACGCGGUAGACUAAAUAGGUUUUAAAUGCCAACUUGGAUGUCCUACGUGGCAGUCCAAAUUAAAUUUAUUUAAUUAAAAACUUAUUUUCAUCCCAACAAUCUGACAUCCAAGUUGACAUUUAAAAUUCAUUUGGACUGUCACGUAAGACUGCC