ncRNA ID | novel_gar_miR1953 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr1:12634795-12634954 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029586 |
Length | 24 |
Mature sequence(if miRNA) | 137 - UUUGGACUGUCACGUAAGACUGCC - 160 |
Stem-loop(if miRNA) |
--     C    C GU  A      AG          C             ----------------------CUACG   CAGUCCAAAU   CAGUC UACG G  AG CUAAAU  GUUUUAAAUG CAACUUGGAUGUC                           UGG          U   ||||| |||| |  || ||||||  |||||||||| |||||||||||||                           |||   GUCAG AUGC C  UC GGUUUA  UAAAAUUUAC GUUGAACCUACAG                           UUA          A CC     A    A UG  A      CU          A             UCUAACAACCCUACUUUUAUUCAAAAA   AUUUAUUUAA |
Stem-loop sequence | CAGUCCUACGCGGUAGACUAAAUAGGUUUUAAAUGCCAACUUGGAUGUCCUACGUGGCAGUCCAAAUUAAAUUUAUUUAAUUAAAAACUUAUUUUCAUCCCAACAAUCUGACAUCCAAGUUGACAUUUAAAAUUCAUUUGGACUGUCACGUAAGACUGCC |