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BaseInfo

ncRNA ID ath-miRf11136-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - UCGAGCACAUGACAUCCAGA - NA
Stem-loop(if miRNA)                                   C            ---C      GU
CUAAUUUUUCGAGCACAUGACAUCCAGAUAGAAG UUUGUUAAACGU    AUCAAA  C
|||||||||||||||||||||||||||||||||| ||||||||||||    ||||||  A
GAUUGAGAAGCUCGUGUACUGUAGGUUUAUCUUC AAACAAUUUGCA    UGGUUU  A
                                  -            AAUA      AG
Stem-loop sequence CUAAUUUUUCGAGCACAUGACAUCCAGAUAGAAGCUUUGUUAAACGUCAUCAAAGUCAAGAUUUGGUAUAAACGUUUAACAAACUUCUAUUUGGAUGUCAUGUGCUCGAAGAGUUAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_117430.3
ncRNA:20   AGACCUACAGUACACGAGCU   1
  |=||||||||||||||||||
targets:1130   UUUGGAUGUCAUGUGCUCGA   1149

1.0 Arabidopsis thaliana Late embryogenesis abundant protein (LEA) family protein (UNE15), mRNA Late embryogenesis abundant protein (LEA) family protein(UNE15) coding protein psRNATarget
NM_115785.2
ncRNA:20   AGACCUACAGUACACGAGCU   1
  |||||*|||||||||||=||
targets:589   UCUGGUUGUCAUGUGCUUGA   608

2.5 Arabidopsis thaliana RNI-like superfamily protein partial mRNA RNI-like superfamily protein(AT3G59230) coding protein psRNATarget