ncRNA ID | novel_gar_miR1951 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr11:24889341-24889401 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029586 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUAUGUGAGAUUGAUCUGACA - 21 |
Stem-loop(if miRNA) |
--UUA   G    UG    G   A     U      UGU AGAU  AUCU ACA AAAUA A      ||| ||||  |||| ||| ||||| U      GCA UCUA  UAGA UGU UUUAU A UAAGA   G    GU    G   A     U |
Stem-loop sequence | UUAUGUGAGAUUGAUCUGACAAAAAUAUAUAUUAUUUAUGUGAGAUUGAUCUGACGAGAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017754454.1 |
|
2.5 | PREDICTED: Gossypium arboreum transcription factor WER-like (LOC108455883), transcript variant X1, mRNA | transcription factor WER-like(LOC108455883) | coding protein | psRNATarget | |||||||||
XM_017754455.1 |
|
2.5 | PREDICTED: Gossypium arboreum transcription factor WER-like (LOC108455883), transcript variant X2, mRNA | transcription factor WER-like(LOC108455883) | coding protein | psRNATarget |