| ncRNA ID | novel_gar_miR1947 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr1:109733864-109734022 [+] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR1029586 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - AGGAGGCAAAAUGCAAUUCGACUU - 24 |
| Stem-loop(if miRNA) |
-- A C UC G AG C CAUAUAC - A GA AGG GG AAAAUGCAAU GACUUCUA UAUAAG CCUC AUGGUACUUUUACC AUUUGAA UAUUA AUUU G ||| || |||||||||| |||||||| |||||| |||| |||||||||||||| ||||||| ||||| |||| A UCC CC UUUUACGUUA CUGAGGAU AUGUUC GGAG UACCAUGAAAAUGG UAAAUUU AUAGU UAAG U UU - - UA G CU A ------- U A GU |
| Stem-loop sequence | AGGAGGCAAAAUGCAAUUCGACUUCUAGUAUAAGAGCCUCCAUGGUACUUUUACCCAUAUACAUUUGAAUAUUAAAUUUGAGAUUGGAAUAUGAUAUUUUAAAUGGUAAAAGUACCAUAGAGGUCCUUGUAGUAGGAGUCAUAUUGCAUUUUCCCCUUU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017768432.1 |
|
1.5 | PREDICTED: Gossypium arboreum tetratricopeptide repeat protein 7A-like (LOC108467698), transcript variant X2, mRNA | tetratricopeptide repeat protein 7A-like(LOC108467698) | coding protein | psRNATarget | |||||||||
| XM_017768430.1 |
|
1.5 | PREDICTED: Gossypium arboreum tetratricopeptide repeat protein 7A-like (LOC108467698), transcript variant X1, mRNA | tetratricopeptide repeat protein 7A-like(LOC108467698) | coding protein | psRNATarget |