ncRNA ID | novel_gar_miR1946 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr11:23014536-23014656 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029586 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UCAGAAAGUCGAAUUGGCAAUGAA - 24 |
Stem-loop(if miRNA) |
--   GA              A   AU         U  UAUG    UAU     UUG   AU   UCA  AAGUCGAAUUGGCA UGA  AAAGAAGCA GA    GGUU   GGGUU   AUU  A   |||  |||||||||||||| |||  ||||||||| ||    ||||   |||||   |||   AGU  UUCAGUUUAACUGU ACU  UUUCUUCGU CU    UCAG   UUCGG   UAA  G AU   UC              C   AC         U  ----    -UC     UAA   CG |
Stem-loop sequence | UCAGAAAGUCGAAUUGGCAAUGAAUAAAGAAGCAUGAUAUGGGUUUAUGGGUUUUGAUUAUAGGCAAUAAUGGCUUCUGACUUCUUGCUUCUUUCAUCACUGUCAAUUUGACUUCUUGAUA |