ncRNA ID | novel_gar_miR1945 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr12:3310089-3310227 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029586 |
Length | 24 |
Mature sequence(if miRNA) | 116 - AUGAAACUGUAAUUCUACGUCAUC - 139 |
Stem-loop(if miRNA) |
--A      U  A      C     -  C    CA   C              GA    ---------G  GAAA    UGAAAC GU AUUCUA GUCAU CU UAUU  UUU CAAUAGGAGAAUGA  AAAU          CC    A    |||||| || |||||| ||||| || ||||  ||| ||||||||||||||  ||||          ||    U    AUUUUG UA UAAGGU CAGUA GA AUAG  AAA GUUAUUCUCUUACU  UUUA          GG    C CAC      C  C      A     A  -    AG   A              -A    AUCUAAAAAA  AGAA |
Stem-loop sequence | AUGAAACUGUAAUUCUACGUCAUCUCUAUUCAUUUCCAAUAGGAGAAUGAGAAAAUGCCGAAAAUCAAGAGGAAAAAAUCUAAUUUAUCAUUCUCUUAUUGAAAAGAGAUAAGAAUGACAUGGAAUCAUCGUUUUACAC |