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BaseInfo

ncRNA ID novel_gar_miR1945
Species Gossypium arboreum
Class miRNA
Genome position Chr12:3310089-3310227 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029586
Length 24
Mature sequence(if miRNA) 116 - AUGAAACUGUAAUUCUACGUCAUC - 139
Stem-loop(if miRNA) --A      U  A      C     -  C    CA   C              GA    ---------G  GAAA
   UGAAAC GU AUUCUA GUCAU CU UAUU  UUU CAAUAGGAGAAUGA  AAAU          CC    A
   |||||| || |||||| ||||| || ||||  ||| ||||||||||||||  ||||          ||    U
   AUUUUG UA UAAGGU CAGUA GA AUAG  AAA GUUAUUCUCUUACU  UUUA          GG    C
CAC      C  C      A     A  -    AG   A              -A    AUCUAAAAAA  AGAA
Stem-loop sequence AUGAAACUGUAAUUCUACGUCAUCUCUAUUCAUUUCCAAUAGGAGAAUGAGAAAAUGCCGAAAAUCAAGAGGAAAAAAUCUAAUUUAUCAUUCUCUUAUUGAAAAGAGAUAAGAAUGACAUGGAAUCAUCGUUUUACAC