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BaseInfo

ncRNA ID novel_gar_miR1943
Species Gossypium arboreum
Class miRNA
Genome position Chr11:41777922-41778032 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029586
Length 24
Mature sequence(if miRNA) 1 - CAUGAGCGUUUUCAUGGGCUUAGG - 24
Stem-loop(if miRNA) --     GA    U      A     G   --A   ------U       UUGG     A
  UAAGU  AUGA GACGCU CAUGA GGU   CGC       CGCUCGU    UAGUC G
  |||||  |||| |||||| ||||| |||   |||       |||||||    ||||| U
  AUUCG  UACU UUGCGA GUACU CCG   GUG       GUGGGUA    AUCAG G
GG     GG    U      -     A   GAG   UAAGUUU       -CAA     U
Stem-loop sequence UAAGUGAAUGAUGACGCUACAUGAGGGUACGCUCGCUCGUUUGGUAGUCAGUGUGACUAAACAUGGGUGUUUGAAUGUGGAGGCCAUCAUGAGCGUUUUCAUGGGCUUAGG