ncRNA ID | novel_gar_miR1943 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr11:41777922-41778032 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029586 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CAUGAGCGUUUUCAUGGGCUUAGG - 24 |
Stem-loop(if miRNA) |
--     GA    U      A     G   --A   ------U       UUGG     A   UAAGU  AUGA GACGCU CAUGA GGU   CGC       CGCUCGU    UAGUC G   |||||  |||| |||||| ||||| |||   |||       |||||||    ||||| U   AUUCG  UACU UUGCGA GUACU CCG   GUG       GUGGGUA    AUCAG G GG     GG    U      -     A   GAG   UAAGUUU       -CAA     U |
Stem-loop sequence | UAAGUGAAUGAUGACGCUACAUGAGGGUACGCUCGCUCGUUUGGUAGUCAGUGUGACUAAACAUGGGUGUUUGAAUGUGGAGGCCAUCAUGAGCGUUUUCAUGGGCUUAGG |