Search result

BaseInfo

ncRNA ID novel_gar_miR1936
Species Gossypium arboreum
Class miRNA
Genome position Chr11:82574741-82574919 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029586
Length 24
Mature sequence(if miRNA) 1 - UGUAUCUGGGUUACCAGUGUCGGC - 24
Stem-loop(if miRNA) --CAAUU            -  UG    GAGA    UCUGA         ---AA    -    AUAUG   ACAAGUGAAAGCGGAACAUCAAGU
       UUGGUGGCCCGG UA  AAAU    CAUU     AUUUGUUUC     GGUG UCUG     UCA                        G
       |||||||||||| ||  ||||    ||||     |||||||||     |||| ||||     |||
       GACCAUUGGGUC AU  UUUA    GUAA     UGAGCAAGG     GGUA GUCC     AGU                        C
CGGCUGU            U  GU    ---G    --CAG         GUAAA    A    ---AU   ACUAACCGACUUCAUUAGGGCUAC
Stem-loop sequence CAAUUUUGGUGGCCCGGUAUGAAAUGAGACAUUUCUGAAUUUGUUUCAAGGUGUCUGAUAUGUCAACAAGUGAAAGCGGAACAUCAAGUGCCAUCGGGAUUACUUCAGCCAAUCAUGAUACCUGAAUGGAAAUGGGAACGAGUGACAAUGGAUUUUGUAUCUGGGUUACCAGUGUCGGC