ncRNA ID | novel_gar_miR1936 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr11:82574741-82574919 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029586 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UGUAUCUGGGUUACCAGUGUCGGC - 24 |
Stem-loop(if miRNA) |
--CAAUU            -  UG    GAGA    UCUGA         ---AA    -    AUAUG   ACAAGUGAAAGCGGAACAUCAAGU        UUGGUGGCCCGG UA  AAAU    CAUU     AUUUGUUUC     GGUG UCUG     UCA                        G        |||||||||||| ||  ||||    ||||     |||||||||     |||| ||||     |||        GACCAUUGGGUC AU  UUUA    GUAA     UGAGCAAGG     GGUA GUCC     AGU                        C CGGCUGU            U  GU    ---G    --CAG         GUAAA    A    ---AU   ACUAACCGACUUCAUUAGGGCUAC |
Stem-loop sequence | CAAUUUUGGUGGCCCGGUAUGAAAUGAGACAUUUCUGAAUUUGUUUCAAGGUGUCUGAUAUGUCAACAAGUGAAAGCGGAACAUCAAGUGCCAUCGGGAUUACUUCAGCCAAUCAUGAUACCUGAAUGGAAAUGGGAACGAGUGACAAUGGAUUUUGUAUCUGGGUUACCAGUGUCGGC |