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BaseInfo

ncRNA ID	novel_gar_miR1933
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr12:10530937-10531040 [-]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR1029586
Length	24
Mature sequence(if miRNA)	1 - AGCAUGGGCGAUGGGACAUUGCGG - 24
Stem-loop(if miRNA)	--  UU    A        ----UG    UG UG G     G  --G   AG UG   GU  UGUU UAUUGUCU      CUGC  U  C UGUUU AU   UGC  G  G   ||  |||| ||||||||      ||||  |  | ||||| ||   |||  |   CG  ACAG GUAGCGGG      GACG  G  G ACGAG UG   GCG  U  U GG  UU    G        UACGAA    GU GU G     G  GCA   GU GG
Stem-loop sequence	GUUUUGUUAUAUUGUCUUGCUGCUGUUGCGUGUUUGAUGUGCAGGUGGUGGUUGGCGACGGUGGAGCAGGUGGUGGCAGAAGCAUGGGCGAUGGGACAUUGCGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001330054.1	ncRNA:24   GGCGUUACAGGGUAGCGGGUACGA   1   *|*||=||**|||||||||||||| targets:1343   ACACAGUGCACCAUCGCCCAUGCU   1366 Target Full Sequence	3.0	Gossypium arboreum sucrose synthase (LOC108489178), mRNA	sucrose synthase(LOC108489178)	coding protein	psRNATarget
JQ995524.1	ncRNA:24   GGCGUUACAGGGUAGCGGGUACGA   1   *|*||=||**|||||||||||||| targets:1343   ACACAGUGCACCAUCGCCCAUGCU   1366 Target Full Sequence	3.0	Gossypium arboreum putative sucrose synthase 3 mRNA, complete cds	NA	coding protein	psRNATarget
HQ680464.1	ncRNA:24   GGCGUUACAGGGUAGCGGGUACGA   1   *|*||=||**|||||||||||||| targets:1288   ACACAGUGCACCAUCGCCCAUGCU   1311 Target Full Sequence	3.0	Gossypium arboreum sucrose synthase 3 mRNA, complete cds	NA	coding protein	psRNATarget