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BaseInfo

ncRNA ID novel_gar_miR1930
Species Gossypium arboreum
Class miRNA
Genome position Chr9:19238886-19239021 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029586
Length 24
Mature sequence(if miRNA) 113 - AAAGCCUGCGGGACUUUAGCUCGG - 136
Stem-loop(if miRNA) --    -        A    -A   C   UACA     -A  AC    -        U    -A  CC   U
  AAAG CCUGCGGG CUUU  GCU GGA    UGUCC  GC  GAAG CCUGCGGG CUUU  GC  GGA A
  |||| |||||||| ||||  ||| |||    |||||  ||  |||| |||||||| ||||  ||  ||| C
  UUUC GGGCGUCC GAAG  CGA CCU    AUAGG  CG  UUUC GGGCGUCC GAAG  CG  UUU A
GA    A        -    CA   -   UUAC     CC  -A    U        -    CA  AU   U
Stem-loop sequence AAAGCCUGCGGGACUUUAGCUCGGAUACAUGUCCAGCACGAAGCCUGCGGGUCUUUAGCCCGGAUACAUUUUUAGCACGAAGCCUGCGGGUCUUUAGCCCGGAUACAUUUCCAGCACGAAGCCUGCGGGACUUUAG