ncRNA ID | novel_gar_miR1930 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr9:19238886-19239021 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029586 |
Length | 24 |
Mature sequence(if miRNA) | 113 - AAAGCCUGCGGGACUUUAGCUCGG - 136 |
Stem-loop(if miRNA) |
--    -        A    -A   C   UACA     -A  AC    -        U    -A  CC   U   AAAG CCUGCGGG CUUU  GCU GGA    UGUCC  GC  GAAG CCUGCGGG CUUU  GC  GGA A   |||| |||||||| ||||  ||| |||    |||||  ||  |||| |||||||| ||||  ||  ||| C   UUUC GGGCGUCC GAAG  CGA CCU    AUAGG  CG  UUUC GGGCGUCC GAAG  CG  UUU A GA    A        -    CA   -   UUAC     CC  -A    U        -    CA  AU   U |
Stem-loop sequence | AAAGCCUGCGGGACUUUAGCUCGGAUACAUGUCCAGCACGAAGCCUGCGGGUCUUUAGCCCGGAUACAUUUUUAGCACGAAGCCUGCGGGUCUUUAGCCCGGAUACAUUUCCAGCACGAAGCCUGCGGGACUUUAG |