ncRNA ID | novel_gar_miR1927 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr9:35805376-35805436 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029586 |
Length | 24 |
Mature sequence(if miRNA) | 38 - GGGAUUGUGGUUCCUCCGGCAGGG - 61 |
Stem-loop(if miRNA) |
GGGAUU    ---U      -     GGGAUU       GUGG    UCCUCC GGCAG      U       ||||    |||||| |||||      G       CACC    AGGAGG UUGUC      G --GUUC    CAGU      G     GGUGUU |
Stem-loop sequence | GGGAUUGUGGUUCCUCCGGCAGGGGAUUUGGUUGUGGCUGUUGGGAGGAUGACCCACCUUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017784530.1 |
|
2.0 | PREDICTED: Gossypium arboreum F-box protein At4g22280-like (LOC108481388), mRNA | F-box protein At4g22280-like(LOC108481388) | coding protein | psRNATarget |