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BaseInfo

ncRNA ID novel_gar_miR1920
Species Gossypium arboreum
Class miRNA
Genome position Chr9:75459086-75459301 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029586
Length 24
Mature sequence(if miRNA) 1 - GUCAGCAGAAAAAACUUCUGUAGA - 24
Stem-loop(if miRNA) --                                                                        U     -AAA         AUAAAUAU        
  UACAGAAGUUUUUUCUGCUGAUAAUAUUACUAAAUUUUUAUCAAUAGAGAAUGGUAAAUGAUGAUAUAUAAA AUUGU    UGAUGAUAU        UGUGUUUUC
  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    |||||||||        ||||||||U
  AUGUCUUCAAAAAAGACGACUGUUAUAAUGAUUUAAAAAUAGUUGUCUCUUACCAUUUACUACUAUGUAUUU UAAUA    AUUAUUAUA        ACGUAAAGU
AG                                                                        -     AAGG         -CAGAGAU        
Stem-loop sequence UACAGAAGUUUUUUCUGCUGAUAAUAUUACUAAAUUUUUAUCAAUAGAGAAUGGUAAAUGAUGAUAUAUAAAUAUUGUAAAUGAUGAUAUAUAAAUAUUGUGUUUUCUUGAAAUGCAUAGAGACAUAUUAUUAGGAAAUAAUUUUAUGUAUCAUCAUUUACCAUUCUCUGUUGAUAAAAAUUUAGUAAUAUUGUCAGCAGAAAAAACUUCUGUAGA