ncRNA ID | ath-miRf11131-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 20 |
Mature sequence(if miRNA) | NA - UGGGUGUCGAUCGACACCAU - NA |
Stem-loop(if miRNA) |
       AA   -G      A        -     --GA  A CGACACC  CUG  GUGUCG UCGACACC AUCAU    GC G |||||||  |||  |||||| |||||||| |||||    || C GCUGUGG  GAC  UACAGC AGCUGUGG UAGUG    CG G        -A   AA      A        C     AAGG  C |
Stem-loop sequence | CGACACCAACUGGGUGUCGAUCGACACCAUCAUGAGCAGCGCGCGGAAGUGAUCGGUGUCGAACGACAUAACAGAGGUGUCG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
JA894865.1 |
|
2.5 | Sequence 182 from Patent WO2011067745 | NA | coding protein | psRNATarget | |||||||||
DQ069810.1 |
|
2.5 | Arabidopsis thaliana At2g13270 mRNA, partial sequence | NA | coding protein | psRNATarget | |||||||||
AY219108.1 |
|
2.5 | Arabidopsis thaliana hypothetical protein (At2g06095/F5K7.25) mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
NM_147252.2 |
|
2.5 | Arabidopsis thaliana transmembrane protein mRNA | transmembrane protein(AT2G06095) | coding protein | psRNATarget |