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BaseInfo

ncRNA ID novel_gar_miR1898
Species Gossypium arboreum
Class miRNA
Genome position Chr12:28875833-28876000 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029586
Length 24
Mature sequence(if miRNA) 1 - ACAGAAGAUUCGUUUUACUCUUUA - 24
Stem-loop(if miRNA) --         U   UCA             AUC          G           -----------------    -      -   --A   A
  AAGAGUAAA UGG   UUUCUGUUAAAAA   UCAUCAAUUU UACUGUUAAAA                 AGUA GAGAUA AUG   CAC U
  ||||||||| |||   |||||||||||||   |||||||||| |||||||||||                 |||| |||||| |||   ||| G
  UUCUCAUUU GCU   GAAGACAAUUUUU   AGUAGUUAAA AUGACAAUUUU                 UCGU CUCUAU UGC   GUG G
AU         U   -UA             -AA          G           UAGCCAUAAACACAAAG    A      A   ACA   U
Stem-loop sequence AAGAGUAAAUUGGUCAUUUCUGUUAAAAAAUCUCAUCAAUUUGUACUGUUAAAAAGUAGAGAUAAUGACACAUGGUGUGACACGUAUAUCUCAUGCUGAAACACAAAUACCGAUUUUUAACAGUAGAAAUUGAUGAAAUUUUUAACAGAAGAUUCGUUUUACUCUUUA