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BaseInfo

ncRNA ID novel_gar_miR1897
Species Gossypium arboreum
Class miRNA
Genome position Chr8:64183083-64183298 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029586
Length 24
Mature sequence(if miRNA) 193 - AACGGAUUGCUGAUGUGGCACAUU - 216
Stem-loop(if miRNA) --         C             U   A                CAUA   U      --UG                    --     UC       ---   UCCAA
  AACGGAUUG UGAUGUGGCACAU AGC CAUUGAGUGACUGACA    AUA UUUUUU    ACUUUUGACUAAAGUUUAAG  GACCU  CUAUAAU   UAG     U
  ||||||||| ||||||||||||| ||| ||||||||||||||||    ||| ||||||    ||||||||||||||||||||  |||||  |||||||   |||     U
  UUGUCUAAC AUUACACUGUGUA UCG GUAAUUUACUGACUGU    UGU AAAAAA    UGAAAACUGAUUUCAAAUUC  UUGGA  GAUAUUA   AUC     U
AA         A             U   G                ACAC   U      UGAA                    UU     GA       CAA   CCCUU
Stem-loop sequence AACGGAUUGCUGAUGUGGCACAUUAGCACAUUGAGUGACUGACACAUAAUAUUUUUUUUGACUUUUGACUAAAGUUUAAGGACCUUCCUAUAAUUAGUCCAAUUUUUCCCCUAAACAUUAUAGAGAGGUUUUCUUAAACUUUAGUCAAAAGUAAGUAAAAAAUUGUCACAUGUCAGUCAUUUAAUGGGCUUAUGUGUCACAUUAACAAUCUGUUAA