ncRNA ID | novel_gar_miR1897 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr8:64183083-64183298 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029586 |
Length | 24 |
Mature sequence(if miRNA) | 193 - AACGGAUUGCUGAUGUGGCACAUU - 216 |
Stem-loop(if miRNA) |
--         C             U   A                CAUA   U      --UG                    --     UC       ---   UCCAA   AACGGAUUG UGAUGUGGCACAU AGC CAUUGAGUGACUGACA    AUA UUUUUU    ACUUUUGACUAAAGUUUAAG  GACCU  CUAUAAU   UAG     U   ||||||||| ||||||||||||| ||| ||||||||||||||||    ||| ||||||    ||||||||||||||||||||  |||||  |||||||   |||     U   UUGUCUAAC AUUACACUGUGUA UCG GUAAUUUACUGACUGU    UGU AAAAAA    UGAAAACUGAUUUCAAAUUC  UUGGA  GAUAUUA   AUC     U AA         A             U   G                ACAC   U      UGAA                    UU     GA       CAA   CCCUU |
Stem-loop sequence | AACGGAUUGCUGAUGUGGCACAUUAGCACAUUGAGUGACUGACACAUAAUAUUUUUUUUGACUUUUGACUAAAGUUUAAGGACCUUCCUAUAAUUAGUCCAAUUUUUCCCCUAAACAUUAUAGAGAGGUUUUCUUAAACUUUAGUCAAAAGUAAGUAAAAAAUUGUCACAUGUCAGUCAUUUAAUGGGCUUAUGUGUCACAUUAACAAUCUGUUAA |