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BaseInfo

ncRNA ID novel_gar_miR1894
Species Gossypium arboreum
Class miRNA
Genome position Chr8:17684951-17685112 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029586
Length 24
Mature sequence(if miRNA) 1 - AUGAAACUGUAAUUCUACGUCAUC - 24
Stem-loop(if miRNA) --AUG       A      C     C       A   C     A        C             CCUC    UUUUUAG
     AAACUGU AUUCUA GUCAU CUUAUCU UUU CAAUA GAGUAUGA AAAUCAGAUUUUU    CUGA       U
     ||||||| |||||| ||||| ||||||| ||| ||||| |||||||| |||||||||||||    ||||
     UUUGACA UAAGGU CAGUA GAAUAGG AAA GUUAU CUCGUACU UUUAGUUUAAGAA    GACU       U
UAUAA       C      A     A       G   A     C        A             AAAA    UCCUUUU
Stem-loop sequence AUGAAACUGUAAUUCUACGUCAUCCUUAUCUAUUUCCAAUAAGAGUAUGACAAAUCAGAUUUUUCCUCCUGAUUUUUAGUUUUUUCCUUCAGAAAAAAGAAUUUGAUUUAUCAUGCUCCUAUUGAAAAGGGAUAAGAAUGACAUGGAAUCACAGUUUAAUAU