ncRNA ID | novel_gar_miR1894 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr8:17684951-17685112 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029586 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUGAAACUGUAAUUCUACGUCAUC - 24 |
Stem-loop(if miRNA) |
--AUG       A      C     C       A   C     A        C             CCUC    UUUUUAG      AAACUGU AUUCUA GUCAU CUUAUCU UUU CAAUA GAGUAUGA AAAUCAGAUUUUU    CUGA       U      ||||||| |||||| ||||| ||||||| ||| ||||| |||||||| |||||||||||||    ||||      UUUGACA UAAGGU CAGUA GAAUAGG AAA GUUAU CUCGUACU UUUAGUUUAAGAA    GACU       U UAUAA       C      A     A       G   A     C        A             AAAA    UCCUUUU |
Stem-loop sequence | AUGAAACUGUAAUUCUACGUCAUCCUUAUCUAUUUCCAAUAAGAGUAUGACAAAUCAGAUUUUUCCUCCUGAUUUUUAGUUUUUUCCUUCAGAAAAAAGAAUUUGAUUUAUCAUGCUCCUAUUGAAAAGGGAUAAGAAUGACAUGGAAUCACAGUUUAAUAU |