ncRNA ID | novel_gar_miR1882 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr7:77557521-77557574 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029586 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUAGACUGUGUGACAGACUGUGUG - 24 |
Stem-loop(if miRNA) |
--    A         -A   UGUG  UG   AUAG CUGUGUGAC  GAC    UG  U   |||| |||||||||  |||    ||   UGUC GAUACACUG  UUG    GC  A UG    -         GG   --UA  UU |
Stem-loop sequence | AUAGACUGUGUGACAGACUGUGUGUGUAUUCGAUGUUGGGUCACAUAGCUGUGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017774748.1 |
|
3.0 | PREDICTED: Gossypium arboreum uncharacterized LOC108473214 (LOC108473214), transcript variant X2, mRNA | uncharacterized LOC108473214(LOC108473214) | coding protein | psRNATarget | |||||||||
XM_017774747.1 |
|
3.0 | PREDICTED: Gossypium arboreum uncharacterized LOC108473214 (LOC108473214), transcript variant X1, mRNA | uncharacterized LOC108473214(LOC108473214) | coding protein | psRNATarget |