ncRNA ID | novel_gar_miR1878 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr7:53687723-53687888 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029586 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUCCUGUUCUGGGGACGGAUAAGG - 24 |
Stem-loop(if miRNA) |
--            G        A          G        -A    UUGU      ------------           ACCUAUAU   AUCCUGUUCUGG GACGGAUA GGGUUAGGGG UGUUACAU  ACAC    UUAUAC            GAUGUGGGUUC        A   |||||||||||| |||||||| |||||||||| ||||||||  ||||    ||||||            |||||||||||   UGGGAUAAGACC UUGUCUAU CCCAAUUUCC ACAAUGUG  UGUG    AGUGUG            CUACACCCAAG        G AU            G        G          -        AG    CUAU      UACCCUGACAAA           CAUGCAGU |
Stem-loop sequence | AUCCUGUUCUGGGGACGGAUAAGGGUUAGGGGGUGUUACAUAACACUUGUUUAUACGAUGUGGGUUCACCUAUAUAGUGACGUACGAACCCACAUCAAACAGUCCCAUGUGUGAUAUCGUGUGAGUGUAACACCUUUAACCCGUAUCUGUUGCCAGAAUAGGGUUA |