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BaseInfo

ncRNA ID novel_gar_miR1876
Species Gossypium arboreum
Class miRNA
Genome position Chr7:46966199-46966377 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029586
Length 24
Mature sequence(if miRNA) 156 - UGUAUCUGGGUUACCAGUGUCGGC - 179
Stem-loop(if miRNA) --CAAUU            -  UG   CGAGA    UCUGA         ---AA    -    AUAUG   ACAAGUGAAAGCGGAACAUCAAGU
       UUGGUGGCCCGG UA  AAA     CAUU     AUUUGUUUC     GGUG UCUG     UCA                        G
       |||||||||||| ||  |||     ||||     |||||||||     |||| ||||     |||
       GACCAUUGGGUC AU  UUU     GUAA     UGAGCAAGG     GGUA GUCC     AGU                        C
CGGCUGU            U  GU   ---AG    --CAG         GUAAA    A    ---AU   ACUAAUCGACUUCAUUAGGGCUAC
Stem-loop sequence CAAUUUUGGUGGCCCGGUAUGAAACGAGACAUUUCUGAAUUUGUUUCAAGGUGUCUGAUAUGUCAACAAGUGAAAGCGGAACAUCAAGUGCCAUCGGGAUUACUUCAGCUAAUCAUGAUACCUGAAUGGAAAUGGGAACGAGUGACAAUGGAUUUUGUAUCUGGGUUACCAGUGUCGGC