ncRNA ID | novel_gar_miR1876 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr7:46966199-46966377 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029586 |
Length | 24 |
Mature sequence(if miRNA) | 156 - UGUAUCUGGGUUACCAGUGUCGGC - 179 |
Stem-loop(if miRNA) |
--CAAUU            -  UG   CGAGA    UCUGA         ---AA    -    AUAUG   ACAAGUGAAAGCGGAACAUCAAGU        UUGGUGGCCCGG UA  AAA     CAUU     AUUUGUUUC     GGUG UCUG     UCA                        G        |||||||||||| ||  |||     ||||     |||||||||     |||| ||||     |||        GACCAUUGGGUC AU  UUU     GUAA     UGAGCAAGG     GGUA GUCC     AGU                        C CGGCUGU            U  GU   ---AG    --CAG         GUAAA    A    ---AU   ACUAAUCGACUUCAUUAGGGCUAC |
Stem-loop sequence | CAAUUUUGGUGGCCCGGUAUGAAACGAGACAUUUCUGAAUUUGUUUCAAGGUGUCUGAUAUGUCAACAAGUGAAAGCGGAACAUCAAGUGCCAUCGGGAUUACUUCAGCUAAUCAUGAUACCUGAAUGGAAAUGGGAACGAGUGACAAUGGAUUUUGUAUCUGGGUUACCAGUGUCGGC |